Publications

*GEECLAB students/postdocs

2018

31. Gomez-Uchida D, M Sepúlveda, B Ernst, TA Contador, S Neira & C Harrod (2018) Chile’s salmon escape demands action. Science (accepted). doi: 10.1126/science. aau7973.

30. Spano CA*, Canales-Aguirre CB*, Musleh SS*, Haussermann V, D Gomez-Uchida (2018) Species delimitation in sea anemones (Anthozoa: Actiniaria): From traditional taxonomy to integrative approaches. Marine Biology Research (submitted MBRJ-2018-0113).

29. Bosch D, Avilla J, Musleh SS* Rodríguez M. (2018) Target-site mutations (AChE and kdr), and PSMO activity in codling moth (Cydia pomonella (L.) (Lepidoptera: Tortricidae)) populations from Spain. Pesticide Biochemistry and Physiologyhttps://doi.org/10.1016/j.pestbp.2018.02.010.

28. Spano CA*, V Häussermann, FH Acuña, C Griffiths, LW Seeb, D Gomez-Uchida (2018) Hierarchical biogeographical processes largely explain the genomic divergence pattern in a species complex of sea anemones (Metridioidea: Sagartiidae: Anthothoe). Molecular Phylogenetics and Evolution 127: 217-228. https://doi.org/10.1016/j.ympev.2018.05.022.

27. Gomez-Uchida D, D Cañas-Rojas*, CM Riva-Rossi, JE Ciancio, MA Pascual, B Ernst, E Aedo, SS Musleh*, F Valenzuela-Aguayo*, TP Quinn, JE Seeb & LW Seeb (2018) Genetic signals of artificial and natural dispersal linked to colonization of South America by non-native Chinook salmon (Oncorhynchus tshawytscha). Ecology and Evolution 8(12): 6192-6209. https://doi.org/10.1002/ece3.4036.

26. Canales-Aguirre CB*, LW Seeb, JE Seeb, MI Cádiz*, SS Musleh*, I Arismendi, G Gajardo, R Galleguillos & D Gomez-Uchida (2018) Contrasting genetic metrics and patterns among introduced rainbow trout (Oncorhynchus mykiss) in two Patagonian lakes differentially impacted by trout aquaculture. Ecology and Evolution 8:273–285. https://doi.org/10.1002/ece3.3574.

2017

25. Sepúlveda M, G Pavez, P Savaria*, C Harrod & D Gomez-Uchida (2017) First documented record of a Southern elephant seal (Mirounga leonina) from a river in southern Chile. Revista Biología Marina y Oceanografía (submitted).

24. Lazo-Cancino D, Musleh SS*, Hernandez CE, Palma E, Rodriguez-Serrano E (2017). Does silvoagropecuary landscape fragmentation affect the genetic diversity of the sigmodontine rodent Oligoryzomys longicaudatus? PeerJ http://doi: 10.7717/peerj.3842. eCollection 2017

23. Spano CA*, V Häussermann (2017) Anthopleura radians, a new species of sea anemone (Cnidaria: Actiniaria: Actiniidae) from northern Chile, with comments on other species of the genus from the South Pacific Ocean. Biodiversity and Natural History 3(1):1-11.

 2016

22. Spano CA*, Hernández CE & MM Rivadeneira (2016) Evolutionary dispersal drives the latitudinal diversity gradient of stony corals. Ecography (in press). : 10.1111/ecog.01855.

21. Musleh SS*,  Gomez-Uchida D, Espinoza C, Ruiz-Tagle N, Gallardo VA (2016) Molecular taxonomy and community dynamics of the phylum Actinobacteria in the Humboldt Sulfuretum off central Chile. Revista de Biologia Marina y Oceanografia 51(1): 89-100. DOI: dx.doi.org/10.4067/S0718-19572016000100009.

20. GJ McKinney, LW Seeb, WA Larson, D Gomez-Uchida, MT Limborg, MSO Brieuc, MV Everett, KA Naish, RK Waples, JE Seeb (2016) A second-generation linkage map reveals candidate genes underlying adaptive variation in Chinook salmon. Molecular Ecology Resources 16 (3): 769-783. doi: 10.1111/1755-0998.12479.

2015

19. Häussermann V, CA Spano*, M Thiel & KB Lohrmann (2015) First record of the sea anemone Diadumene lineata (Verrill, 1869) from the Chilean coast. Spixiana 38(1): 39-42.

18. Benavente JN*, LW Seeb, JE Seeb, I Arismendi, CE Hernández, G Gajardo, R Galleguillos, MI Cádiz*, SS Musleh* & D Gomez-Uchida (2015) Temporal genetic variance and propagule-driven genetic structure characterize naturalized rainbow trout (Oncorhynchus mykiss) from a Patagonian lake impacted by trout farming. PLOS ONE 10(11): e0142040. https://doi.org/10.1371/journal.pone.0142040

17. Canales-Aguirre CB*, Quiñones A, Hernandez CE, Neill PE & A Brante (2015) Population genetics of the invasive cryptogenic anemone, Anemonia alicemartinae, along the southeastern Pacific coast. Journal of Sea Research 102: 1-9. DOI:10.1016/j.seares.2015.03.005

16. Vargas PV*, I Arismendi & D Gomez-Uchida (2015) Evaluating taxonomic homogenization of freshwater fish assemblages in Chile. Revista Chilena de Historia Natural 88: 16. DOI: 10.1186/s40693-015-0046-2.

2014

15. Fuentes-Navarrete M*, D Gomez-Uchida, C Gallardo-Escarate, CB Canales-Aguirre, R Galleguillos & JC Ortiz  (2014) Development of microsatellites for the Southern Darwin’s frog Rhinoderma darwiniiConservation Genetics Resources 6: 1035-1037DOI: 10.1007/s12686-014-0279-4.

14. Gomez-Uchida D, Seeb LW, Warheit KI, McKinney GM & JE Seeb (2014) Deep sequencing of the transcriptome and mining of single nucleotide polymorphisms (SNPs) provide genomic resources for applied studies in Chinook salmon (Oncorhynchus tshawytscha). Conservation Genetics Resources 6: 807-811. DOI: 10.1007/s12686-014-0235-3.

13. Arismendi I, B Penaluna, JB Dunham, D Soto, IA Fleming, D Gomez-Uchida, G Gajardo, PV Vargas* & J Leon-Muñoz (2014) Differential invasion success of salmonids in Southern Chile: patterns and hypotheses. Reviews in Fish Biology & Fisheries 24: 919-941. DOI: 10.1007/s11160-014-9351-0.

2013

12. Petrou E, L Hauser, RS Waples, JE Seeb, WD Templin, D Gomez-Uchida & LW Seeb. (2013) Secondary contact and changes in coastal hydrology influence the nonequilibrium  population structure of a salmonid (Oncorhynchus keta). Molecular Ecology 2: 5848-5860.

11. Gomez-Uchida D, FP Palstra, TW Knight & DE Ruzzante (2013) Contemporary effective population and metapopulation size (Ne and meta-Ne): comparison among three salmonids inhabiting a fragmented system and differing in gene flow and its asymmetries Ecology and Evolution 3: 569-580.

2003 – 2012

10. Gomez-Uchida D, JE Seeb, C Habicht & LW Seeb (2012) Allele frequency stability in large, wild exploited populations over multiple generations: insights from Alaska sockeye salmon. Canadian Journal of Fisheries and Aquatic Sciences 69: 916–929.

9. Gomez-Uchida D, JE Seeb, MJ Smith, C Habicht, TP Quinn & LW Seeb (2011) Single nucleotide polymorphisms unravel hierarchical divergence and signatures of selection among Alaskan sockeye salmon populations. BMC Evolutionary Biology 11:48.

8. Gomez-Uchida D, TW Knight & DE Ruzzante (2009) Interaction of landscape and life-history attributes on genetic diversity, neutral divergence, and gene flow in a pristine community of salmonids. Molecular Ecology 18: 4854–4869.

7. Gomez-Uchida D, KP Dunphy, MF O’Connell & DE Ruzzante (2008) Genetic divergence between Arctic charr morphs in Gander Lake, Newfoundland: roles of migration, mutation and unequal effective population size. Journal of Fish Biology 73: 2040-2057.

6. Gomez-Uchida D & MA Banks (2007) A simulation approach of population differentiation and individual assignment to assess relevant genetic data for rockfish conservation. In: J Heifetz, J DiCosimo, AJ Gharrett, MS Love, VM O’Connell & RD Stanley (eds) Biology, Assessment, and Management of North Pacific Rockfishes. Alaska Sea Grant, University of Alaska Fairbanks: 141-152 (book chapter).

5. Gomez-Uchida D & MA Banks (2006) Estimation of effective population size for the long-lived darkblotched rockfish Sebastes crameri. Journal of Heredity 97: 603-606.

4. Miller JA, MA Banks, D Gomez-Uchida & AL Shanks (2005) A comparison of population structure in black rockfish (Sebastes melanops) as determined with otolith microchemistry and microsatellite DNA. Canadian Journal of Fisheries and Aquatic Sciences 62: 2189-2198.

3. Gomez-Uchida D & MA Banks (2005) Microsatellite analyses of spatial genetic structure in darkblotched rockfish (Sebastes crameri): is pooling samples safe? Canadian Journal of Fisheries and Aquatic Sciences 62: 1874-1886.

2. Gomez-Uchida D, EA Hoffman, WR Ardren & MA Banks (2003) Microsatellite markers for the heavily exploited canary (Sebastes pinniger) and other rockfish species. Molecular Ecology Notes 3: 387-389.

1. Gomez-Uchida D, D Weetman, L Hauser, R Galleguillos & M Retamal (2003) Allozyme and AFLP analysis of genetic population structure in the hairy edible crab Cancer setosus from the Chilean coast. Journal of Crustacean Biology 23(2): 486-494.